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Package 184/233HostnameOS / ArchBUILDCHECKBUILD BIN
Rgraphviz 1.16.0
Li Long
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
Last Changed Rev: 27857 / Revision: 30966
Last Changed Date: 2007-10-08 16:33:43 -0700 (Mon, 08 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64 [ OK ] OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: Rgraphviz
Version: 1.16.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build Rgraphviz
StartedAt: 2008-04-09 13:37:03 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 13:37:18 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 15.5 seconds
RetCode: 0
Status: OK
PackageFile: Rgraphviz_1.16.0.tar.gz
PackageFileSize: 1.291 MiB

Command output

* checking for file 'Rgraphviz/DESCRIPTION' ... OK
* preparing 'Rgraphviz':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'Rgraphviz' ...
configure: No --with-graphviz option was specified. Trying to find graphviz using other methods.
checking for pkg-config... /usr/bin/pkg-config
configure: Found graphviz 2.12
configure: We have inferred the following flags for graphviz
configure: ..PKG_CPPFLAGS=-I/usr/include/graphviz  
configure: ..PKG_LIBS=-lgvc  
checking for whether compiler has bool... checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c agopen.c -o agopen.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c agread.c -o agread.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c agwrite.c -o agwrite.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c bezier.c -o bezier.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c buildEdgeList.c -o buildEdgeList.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c buildNodeList.c -o buildNodeList.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c doLayout.c -o doLayout.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c graphvizVersion.c -o graphvizVersion.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c init.c -o init.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c LL_funcs.c -o LL_funcs.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c Rgraphviz.c -o Rgraphviz.o
Rgraphviz.c:18: warning: C99 inline functions are not supported; using GNU89
Rgraphviz.c:18: warning: to disable this warning use -fgnu89-inline or the gnu_inline function attribute
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/include/graphviz    -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=12  -DHAVE_STDBOOL_H=1 -DHAVE_BOOL=1 -I/usr/local/include    -fpic  -g -O2 -Wall -c RgraphvizInit.c -o RgraphvizInit.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o agopen.o agread.o agwrite.o bezier.o buildEdgeList.o buildNodeList.o doLayout.o graphvizVersion.o init.o LL_funcs.o Rgraphviz.o RgraphvizInit.o -lgvc    -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
Loading required package: graph
Creating a new generic function for "head" in "Rgraphviz"
Creating a new generic function for "tail" in "Rgraphviz"
Creating a new generic function for "lines" in "Rgraphviz"
Creating a new generic function for "plot" in "Rgraphviz"
** help
 >>> Building/Updating help pages for package 'Rgraphviz'
     Formats: text html latex example 
  AgEdge-class                      text    html    latex   example
  AgNode-class                      text    html    latex   example
  AgTextLabel-class                 text    html    latex   example
  BezierCurve-class                 text    html    latex   example
  GraphvizAttributes                text    html    latex   example
  GraphvizLayouts                   text    html    latex   example
  Ragraph-class                     text    html    latex   example
  agopen                            text    html    latex   example
  agopenSimple                      text    html    latex   example
  agwrite                           text    html    latex   example
  boundingBox-class                 text    html    latex   example
  buildNodeList                     text    html    latex   example
  clusterData-methods               text    html    latex   example
  getDefaultAttrs                   text    html    latex   example
  graphData-methods                 text    html    latex
  graphDataDefaults-methods         text    html    latex
  graphvizVersion                   text    html    latex   example
  layoutGraph                       text    html    latex   example
  makeNodeAttrs                     text    html    latex   example
  pEdge-class                       text    html    latex   example
  pNode-class                       text    html    latex   example
  pieGlyph                          text    html    latex   example
  plot-methods                      text    html    latex   example
  removedEdges                      text    html    latex   example
  toDot-methods                     text    html    latex   example
  toFile                            text    html    latex   example
  xyPoint-class                     text    html    latex   example
** building package indices ...
* DONE (Rgraphviz)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'Rgraphviz_1.16.0.tar.gz'