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Package 88/233HostnameOS / ArchBUILDCHECKBUILD BIN
GGtools 1.6.1
Vince Carey
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
Last Changed Rev: 28052 / Revision: 30966
Last Changed Date: 2007-10-17 18:50:49 -0700 (Wed, 17 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686 [ OK ] OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: GGtools
Version: 1.6.1
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build GGtools
StartedAt: 2008-04-09 15:28:47 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 15:31:11 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 144.0 seconds
RetCode: 0
Status: OK
PackageFile: GGtools_1.6.1.tar.gz
PackageFileSize: 17.02 MiB

Command output

* checking for file 'GGtools/DESCRIPTION' ... OK
* preparing 'GGtools':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'GGtools' ...
** libs
g++ -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c -o minfra.o In function 'matrix operator/(matrix&, matrix&)': warning: unused variable 'a2c' In function 'matrix delete_col(matrix, int)': warning: unused variable 'ncop' warning: unused variable 'nresel' warning: unused variable 'skip' warning: unused variable 'resbase' warning: unused variable 'Xbase' In function 'int split(matrix&, matrix&, matrix*)': warning: unused variable 'j' In function 'matrix* split(matrix&, matrix&)': warning: unused variable 'j'
g++ -shared -L/usr/local/lib -o minfra.o   -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: hgfocus
Loading required package: geneplotter
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: mgu74av2
** help
Note: unmatched right brace in 'snpMeta-class' on or after line 44
 >>> Building/Updating help pages for package 'GGtools'
     Formats: text html latex example 
  GGfitter-class                    text    html    latex   example
  HM2rac                            text    html    latex   example
  HMworkflow                        text    html    latex   example
  Strains2rac                       text    html    latex   example
  geneLocs                          text    html    latex   example
  genoStrings                       text    html    latex   example
  make_racExSet                     text    html    latex   example
  oGtypeExSet-class                 text    html    latex   example
  plot_EvG                          text    html    latex   example
  racExSet-class                    text    html    latex   example
  snpMeta-class                     text    html    latex   example
  snpScreen                         text    html    latex   example
  snps                              text    html    latex   example
** building package indices ...
Loading required package: methods
* DONE (GGtools)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'GGtools/inst/ggexpsite/ggexplorer/text' is empty
* building 'GGtools_1.6.1.tar.gz'