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Package 114/233HostnameOS / ArchBUILDCHECKBUILD BIN
limmaGUI 1.14.1
Keith Satterley
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/limmaGUI
Last Changed Rev: 27741 / Revision: 30807
Last Changed Date: 2007-10-03 19:51:29 -0700 (Wed, 03 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK [ OK ]
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: limmaGUI
Version: 1.14.1
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check limmaGUI_1.14.1.tar.gz
StartedAt: 2008-04-02 15:59:59 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 16:00:34 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 34.5 seconds
RetCode: 0
Status: OK
CheckDir: limmaGUI.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/limmaGUI.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'limmaGUI/DESCRIPTION' ... OK
* this is package 'limmaGUI' version '1.14.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'limmaGUI' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Error in e[[4]] : subscript out of bounds
Calls: <Anonymous> ... collectUsageArgs -> walkCode -> h -> walkCode -> typeof
Execution halted
Error in e[[4]] : subscript out of bounds
Calls: <Anonymous> ... collectUsageArgs -> walkCode -> h -> walkCode -> typeof
Execution halted
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating limmaGUI-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating limmaGUI-manual.tex ... OK
* checking limmaGUI-manual.tex ... OK

limmaGUI.Rcheck/00install.out:

* Installing *source* package 'limmaGUI' ...
** R
** inst
** preparing package for lazy loading
Loading required package: limma
Loading required package: tcltk
Loading Tcl/Tk interface ... done
** help
Note: unmatched right brace in 'limmaGUI' on or after line 139
 >>> Building/Updating help pages for package 'limmaGUI'
     Formats: text html latex example 
  LGchangelog                       text    html    latex
  limmaGUI                          text    html    latex
** building package indices ...
* DONE (limmaGUI)