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Package 93/233HostnameOS / ArchBUILDCHECKBUILD BIN
goTools 1.10.0
Agnes Paquet
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/goTools
Last Changed Rev: 27709 / Revision: 30807
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: goTools
Version: 1.10.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build goTools
StartedAt: 2008-04-02 16:19:04 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 16:23:07 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 243.0 seconds
RetCode: 0
Status: OK
PackageFile: goTools_1.10.0.tar.gz
PackageFileSize: 105.9 KiB

Command output

* checking for file 'goTools/DESCRIPTION' ... OK
* preparing 'goTools':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst561204119


---------- Making package goTools ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package goTools for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
Loading required package: GO
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'goTools'
     Formats: text html latex example chm 
  EndNodeList                       text    html    latex   example chm
  goTools-internal                  text    html    latex           chm
  ontoCompare                       text    html    latex   example chm
  probeID                           text    html    latex           chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "fx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\goTools\chm\goTools.chm



HHC4016: Warning: Cannot open "fx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

* DONE (goTools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'goTools_1.10.0.tar.gz'