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Package 30/233HostnameOS / ArchBUILDCHECKBUILD BIN
bgx 1.2.2
Ernest Turro
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/bgx
Last Changed Rev: 29287 / Revision: 30807
Last Changed Date: 2007-12-20 14:53:35 -0800 (Thu, 20 Dec 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: bgx
Version: 1.2.2
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=bgx.buildbin-libdir bgx_1.2.2.tar.gz
StartedAt: 2008-04-02 19:07:28 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 19:08:07 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 38.8 seconds
RetCode: 0
Status: OK
PackageFile: bgx_1.2.2.zip
PackageFileSize: 419.6 KiB

Command output

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/bgx.buildbin-libdir

Using auto-selected zip options ''

---------- Making package bgx ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making qnorm.d from qnorm.c
making bgx.d from bgx.cc
making bgx_frontend.d from bgx_frontend.cc
making rundir.d from rundir.cc
making sokal.d from sokal.cc
gcc-sjlj  -std=gnu99 -I ../boostIncl -IE:/biocbld/bbs-2.1-bioc/R/include   -DUSING_R -march=i486 -ffast-math -O3  -std=c99  -O3 -Wall  -c qnorm.c -o qnorm.o
g++-sjlj  -I ../boostIncl -IE:/biocbld/bbs-2.1-bioc/R/include   -DUSING_R -march=i486 -ffast-math -O3  -O2 -Wall  -c bgx.cc -o bgx.o
g++-sjlj  -I ../boostIncl -IE:/biocbld/bbs-2.1-bioc/R/include   -DUSING_R -march=i486 -ffast-math -O3  -O2 -Wall  -c bgx_frontend.cc -o bgx_frontend.o
g++-sjlj  -I ../boostIncl -IE:/biocbld/bbs-2.1-bioc/R/include   -DUSING_R -march=i486 -ffast-math -O3  -O2 -Wall  -c rundir.cc -o rundir.o
g++-sjlj  -I ../boostIncl -IE:/biocbld/bbs-2.1-bioc/R/include   -DUSING_R -march=i486 -ffast-math -O3  -O2 -Wall  -c sokal.cc -o sokal.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I E:/biocbld/bbs-2.1-bioc/R/include  -i bgx_res.rc -o bgx_res.o
g++-sjlj   -shared -s  -o bgx.dll bgx.def qnorm.o bgx.o bgx_frontend.o rundir.o sokal.o bgx_res.o  -LE:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'bgx'
     Formats: text html latex example chm 
  analysis.bgx                      text    html    latex   example chm
  bgx                               text    html    latex   example chm
  mcmc.bgx                          text    html    latex   example chm
  readOutput.bgx                    text    html    latex   example chm
  saveAffinityPlot.bgx              text    html    latex   example chm
  setupVars.bgx                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.5472\bgx\chm\bgx.chm





Compile time: 0 minutes, 0 seconds

7	Topics

35	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.5472\bgx\chm\bgx.chm, 27,172 bytes

Compression decreased file by 5,031 bytes.

  preparing package bgx for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: splines
  adding MD5 sums

packaged installation of package 'bgx' as bgx_1.2.2.zip
* DONE (bgx)