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Package 7/233HostnameOS / ArchBUILDCHECKBUILD BIN
affycomp 1.14.0
Rafael A. Irizarry
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/affycomp
Last Changed Rev: 27709 / Revision: 30807
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: affycomp
Version: 1.14.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=affycomp.buildbin-libdir affycomp_1.14.0.tar.gz
StartedAt: 2008-04-02 22:47:23 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 22:48:58 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 94.7 seconds
RetCode: 0
Status: OK
PackageFile: affycomp_1.14.0.zip
PackageFileSize: 69.36 MiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/affycomp.buildbin-libdir

Using auto-selected zip options 'affycomp-ZIPDATA=zip affycomp-HELP=ziponly'

---------- Making package affycomp ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  zipping data
  installing help
 >>> Building/Updating help pages for package 'affycomp'
     Formats: text html latex example chm 
  SD                                text    html    latex   example chm
  affycomp.compfigs.auxiliary       text    html    latex   example chm
  affycomp.figures.auxiliary        text    html    latex   example chm
  affycomp.table                    text    html    latex   example chm
  affycompPlot                      text    html    latex   example chm
  assessAll                         text    html    latex           chm
  assessDilution                    text    html    latex           chm
  assessSD                          text    html    latex           chm
  assessSpikeIn                     text    html    latex           chm
  assessSpikeIn2                    text    html    latex           chm
  dilution.phenodata                text    html    latex           chm
  exprset.log                       text    html    latex           chm
  hgu133a.spikein.phenodata         text    html    latex           chm
  lw.sd.assessment                  text    html    latex           chm
  mas5.assessment                   text    html    latex           chm
  readin                            text    html    latex           chm
  remove.hgu133a.xhyb               text    html    latex           chm
  rma.assessment                    text    html    latex           chm
  rma.sd.assessment                 text    html    latex           chm
  spikein.phenodata                 text    html    latex           chm
  xhyb                              text    html    latex           chm
  zipping help files
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.652\affycomp\chm\affycomp.chm



HHC4016: Warning: Cannot open "Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package affycomp for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  adding MD5 sums

packaged installation of package 'affycomp' as affycomp_1.14.0.zip
* DONE (affycomp)