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Package 53/234HostnameOSArchBUILDCHECKBUILD BIN
copa 1.6.0
James W. MacDonald
Last Changed Date: 2007-10-02 17:41:09 -0700
Last Changed Rev: 27709
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
pitt Mac OS X (10.4.10) i386 [ OK ] OK  OK 
Package: copa
Version: 1.6.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build copa
RetCode: 0
Time: 13.5 seconds
Status: OK
PackageFile: copa_1.6.0.tar.gz

Command output

* checking for file 'copa/DESCRIPTION' ... OK
* preparing 'copa':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'copa' ...
** libs
** arch - i386
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -Wall -march=nocona -c copa.c -o copa.o
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o copa.so copa.o   -F/Library/Frameworks/R.framework/.. -framework R 
** arch - ppc
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c copa.c -o copa.o
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o copa.so copa.o   -F/Library/Frameworks/R.framework/.. -framework R 
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'copa'
     Formats: text html latex example 
  copa                              text    html    latex   example
  copa.package                      text    html    latex
  copaFilter                        text    html    latex
  copaPerm                          text    html    latex
  copaTable                         text    html    latex   example
  getans                            text    html    latex
  pSum                              text    html    latex
  perm.mat                          text    html    latex
  plotCopa                          text    html    latex   example
  scatterPlotCopa                   text    html    latex   example
  summaryCopa                       text    html    latex   example
** building package indices ...
* DONE (copa)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'copa_1.6.0.tar.gz'