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seqLogo

1.2.0

Oliver Bembom
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK [ OK ]
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
Package: seqLogo
Version: 1.2.0
Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD check seqLogo_1.2.0.tar.gz
RetCode: 0
Time: 63.5 seconds
Status: OK
CheckDir: seqLogo.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.0-bioc/meat/seqLogo.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'seqLogo/DESCRIPTION' ... OK
* this is package 'seqLogo' version '1.2.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'seqLogo' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating seqLogo-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating seqLogo-manual.tex ... OK
* checking seqLogo-manual.tex ... OK

seqLogo.Rcheck/00install.out:

* Installing *source* package 'seqLogo' ...
** R
** inst
** preparing package for lazy loading
Loading required package: grid
Creating a new generic function for "plot" in "seqLogo"
Creating a new generic function for "summary" in "seqLogo"
Creating a new generic function for "print" in "seqLogo"
** help
 >>> Building/Updating help pages for package 'seqLogo'
     Formats: text html latex example 
  makePWM                           text    html    latex   example
  pwm-class                         text    html    latex   example
  seqLogo                           text    html    latex   example
** building package indices ...
* DONE (seqLogo)