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annotate

1.14.1

Biocore Team
Last Changed Date: 2007-04-24 14:06:34 -0700
Last Changed Rev: 24225
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  ERROR skipped
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK [ OK ] OK 
derby Mac OS X (10.4.9) i686  OK  WARNINGS 
Package: annotate
Version: 1.14.1
Command: E:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check annotate_1.14.1.tar.gz
RetCode: 0
Time: 267.4 seconds
Status: OK
CheckDir: annotate.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.0-bioc/meat/annotate.Rcheck'
* using R version 2.5.0 (2007-04-23)
* checking for file 'annotate/DESCRIPTION' ... OK
* this is package 'annotate' version '1.14.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'annotate' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating annotate-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating annotate-manual.tex ... OK
* checking annotate-manual.tex ... OK

annotate.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.0-bioc/meat/annotate.Rcheck


---------- Making package annotate ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'annotate'
     Formats: text html latex example chm 
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Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.0-bioc\meat\annotate.Rcheck\00_pkg_src\annotate\chm\annotate.chm


Compile time: 0 minutes, 1 second
59	Topics
310	Local links
7	Internet links
1	Graphic


Created e:\biocbld\bbs-2.0-bioc\meat\annotate.Rcheck\00_pkg_src\annotate\chm\annotate.chm, 93,131 bytes
Compression decreased file by 139,847 bytes.
  adding MD5 sums

* DONE (annotate)