Back to the "Multiple platform build/check report"

Package 8/214HostnameOSArchBUILDCHECKBUILD BIN

affycoretools

1.8.0

James W. MacDonald
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc [ ERROR ]skipped
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
derby Mac OS X (10.4.9) i686  OK  OK 
Package: affycoretools
Version: 1.8.0
Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD build affycoretools
RetCode: 1
Time: 29.0 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'affycoretools/DESCRIPTION' ... OK
* preparing 'affycoretools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'affycoretools' ...
** R
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: limma
Loading required package: GOstats
Loading required package: graph
Loading required package: GO
Loading required package: annotate
Loading required package: RBGL
Loading required package: Category
Loading required package: KEGG
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: Matrix
Loading required package: lattice
Loading required package: biomaRt
Warning in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = lib.loc) : 
	 there is no package called 'biomaRt'
Error: package 'biomaRt' could not be loaded
Execution halted
ERROR: lazy loading failed for package 'affycoretools'
** Removing '/tmp/Rinst1386863823/affycoretools'
 ERROR
Installation failed.
Removing '/tmp/Rinst1386863823'