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GlobalAncova

2.5.1

R. Meister
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686[ ERROR ]skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 OK  OK  OK 
Windows Server 2003 NA OK  ERROR  OK 
Mac OS X (10.4.6) i686 OK  WARNINGS 
Package: GlobalAncova
Version: 2.5.1
Command: /loc/biocbuild/2.0d/R/bin/R CMD build GlobalAncova
RetCode: 1
Time: 199.5 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'GlobalAncova/DESCRIPTION' ... OK
* preparing 'GlobalAncova':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'GlobalAncova' ...
** R
** data
** inst
** preparing package for lazy loading
** help
 >>> Building/Updating help pages for package 'GlobalAncova'
     Formats: text html latex example 
  GlobalAncova-methods              text    html    latex
  GlobalAncova                      text    html    latex   example
  GlobalAncova.closed-methods       text    html    latex
  GlobalAncova.closed               text    html    latex
  Plot.genes-methods                text    html    latex
  Plot.genes                        text    html    latex   example
  Plot.subjects-methods             text    html    latex
  Plot.subjects                     text    html    latex   example
  pathways                          text    html    latex   example
  phenodata                         text    html    latex   example
  vantVeer                          text    html    latex   example
** building package indices ...
* DONE (GlobalAncova)
* creating vignettes ... ERROR
Loading required package: multtest
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: survival
Loading required package: splines
Loading required package: Rgraphviz
Loading required package: graph
Loading required package: geneplotter
Loading required package: annotate
Loading required package: lattice
There were 21 warnings (use warnings() to see them)
Loading required package: Rgraphviz
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Loading required package: Rgraphviz
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'