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Package 196/208OSArchBUILDCHECKBUILD BIN

stam

1.7.0

Claudio Lottaz
Linux (SUSE 9.2) x86_64 ERROR skipped
Linux (SUSE 10.1) x86_64 ERROR skipped
Linux (SUSE 9.2) i686 ERROR skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 ERROR skippedskipped
Windows Server 2003 NA[ ERROR ]skippedskipped
Mac OS X (10.4.6) i686 OK  OK 
Package: stam
Version: 1.7.0
Command: E:\biocbld\2.0d\R\bin\R.exe CMD build stam
RetCode: 1
Time: 10.5 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/2.0d/tmpdir/Rinst551202001


---------- Making package stam ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making util.d from util.c
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c util.c -o util.o
windres --include-dir e:/biocbld/2.0d/R/include  -i stam_res.rc -o stam_res.o
gcc  -shared -s  -o stam.dll stam.def util.o stam_res.o  -Le:/biocbld/2.0d/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  save image
Loading required package: GO
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: pamr
Loading required package: cluster
Error: package 'annaffy' required by 'stam' could not be found
Execution halted
execution of package source for 'stam' failed
make[2]: *** [E:/biocbld/2.0d/tmpdir/Rinst551202001/stam/R/stam] Error 1
make[1]: *** [all] Error 2
make: *** [pkg-stam] Error 2
*** Installation of stam failed ***

Removing 'E:/biocbld/2.0d/tmpdir/Rinst551202001/stam'
 ERROR
Installation failed.
Removing 'E:/biocbld/2.0d/tmpdir/Rinst551202001'