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Package 46/208OSArchBUILDCHECKBUILD BIN

cosmo

1.0.4

Oliver Bembom
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  OK 
Solaris 2.9 sparc OK  OK 
Windows Server 2003 x86_64 OK  OK  OK 
Windows Server 2003 NA[ ERROR ]skippedskipped
Mac OS X (10.4.6) i686 OK  OK 
Package: cosmo
Version: 1.0.4
Command: E:\biocbld\2.0d\R\bin\R.exe CMD build cosmo
RetCode: 1
Time: 386.4 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'cosmo/DESCRIPTION' ... OK
* preparing 'cosmo':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/2.0d/tmpdir/Rinst516436605


---------- Making package cosmo ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making alloc.d from alloc.c
making back.d from back.c
making constraints.d from constraints.c
making cosmo.d from cosmo.c
making cregistration.d from cregistration.c
making donlp2.d from donlp2.c
making estarts.d from estarts.c
making eval.d from eval.c
making fit.d from fit.c
making free.d from free.c
making init.d from init.c
making io.d from io.c
making lstarts.d from lstarts.c
making matLib.d from matLib.c
making newx.d from newx.c
making optimize.d from optimize.c
making posterior.d from posterior.c
making precalc.d from precalc.c
making rio.d from rio.c
making theta.d from theta.c
making user_eval.d from user_eval.c
making xml.d from xml.c
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c alloc.c -o alloc.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c back.c -o back.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c constraints.c -o constraints.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c cosmo.c -o cosmo.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c cregistration.c -o cregistration.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c donlp2.c -o donlp2.o
donlp2.c: In function `o8st':
donlp2.c:438: warning: unused variable `k'
donlp2.c:439: warning: unused variable `tol1'
donlp2.c:439: warning: unused variable `bd0'
donlp2.c:439: warning: unused variable `gxi'
donlp2.c:439: warning: unused variable `hxi'
donlp2.c:439: warning: unused variable `term'
donlp2.c: In function `o8opti':
donlp2.c:2055: warning: unused variable `l'
donlp2.c:2068: warning: unused variable `eval_err'
donlp2.c: In function `o8dird':
donlp2.c:4096: warning: unused variable `term1'
donlp2.c:4100: warning: label `L100' defined but not used
donlp2.c: In function `o8eval':
donlp2.c:4387: warning: unused variable `j'
donlp2.c: In function `o8elim':
donlp2.c:5003: warning: unused variable `l'
donlp2.c: In function `o8qpdu':
donlp2.c:5731: warning: unused variable `term2'
donlp2.c:6394: warning: label `L500' defined but not used
donlp2.c: In function `o8dlcd':
donlp2.c:7129: warning: label `L20' defined but not used
donlp2.c: In function `i1_malloc':
donlp2.c:7849: warning: unused variable `j'
donlp2.c: In function `i1_free':
donlp2.c:7886: warning: unused variable `i'
donlp2.c: In function `d1_malloc':
donlp2.c:7979: warning: unused variable `j'
donlp2.c: In function `d1_free':
donlp2.c:8014: warning: unused variable `i'
donlp2.c: In function `l1_malloc':
donlp2.c:8108: warning: unused variable `j'
donlp2.c: In function `l1_free':
donlp2.c:8143: warning: unused variable `i'
donlp2.c: At top level:
INCLUDE/o8gene.h:23: warning: 'o8fcount' defined but not used
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c estarts.c -o estarts.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c eval.c -o eval.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c fit.c -o fit.o
fit.c: In function `getCvPwmRisk':
fit.c:773: warning: 'nnSites' might be used uninitialized in this function
fit.c:774: warning: 'numSv' might be used uninitialized in this function
fit.c:783: warning: 'numSites0' might be used uninitialized in this function
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c free.c -o free.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c init.c -o init.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c io.c -o io.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c lstarts.c -o lstarts.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c matLib.c -o matLib.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c newx.c -o newx.o
newx.c: In function `newx':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8n'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nlin'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nonlin'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nstep'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:11: warning: unused variable `o8name'
INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te0'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te2'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te3'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8silent'
INCLUDE/o8fuco.h:16: warning: unused variable `o8analyt'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c optimize.c -o optimize.o
optimize.c: In function `user_init_size':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:11: warning: unused variable `o8name'
INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te0'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te2'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te3'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8silent'
INCLUDE/o8fuco.h:16: warning: unused variable `o8analyt'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls'
INCLUDE/o8comm.h:12: warning: unused variable `o8runtim'
INCLUDE/o8comm.h:13: warning: unused variable `o8optite'
INCLUDE/o8comm.h:14: warning: unused variable `o8accinf'
INCLUDE/o8comm.h:15: warning: unused variable `o8itstep'
INCLUDE/o8comm.h:15: warning: unused variable `o8phase'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsist'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi0'
INCLUDE/o8comm.h:18: warning: unused variable `o8psi1'
INCLUDE/o8comm.h:18: warning: unused variable `o8psist'
INCLUDE/o8comm.h:18: warning: unused variable `o8psimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi0'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi1'
INCLUDE/o8comm.h:19: warning: unused variable `o8phimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx0'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx1'
INCLUDE/o8comm.h:20: warning: unused variable `o8fxst'
INCLUDE/o8comm.h:20: warning: unused variable `o8fmin'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0'
INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm'
INCLUDE/o8comm.h:20: warning: unused variable `o8sig0'
INCLUDE/o8comm.h:20: warning: unused variable `o8dscal'
INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm'
INCLUDE/o8comm.h:21: warning: unused variable `o8sig'
INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin'
INCLUDE/o8comm.h:21: warning: unused variable `o8dirder'
INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi'
INCLUDE/o8comm.h:21: warning: unused variable `o8upsim'
INCLUDE/o8comm.h:22: warning: unused variable `o8x'
INCLUDE/o8comm.h:22: warning: unused variable `o8x0'
INCLUDE/o8comm.h:22: warning: unused variable `o8x1'
INCLUDE/o8comm.h:22: warning: unused variable `o8xmin'
INCLUDE/o8comm.h:22: warning: unused variable `o8d'
INCLUDE/o8comm.h:22: warning: unused variable `o8d0'
INCLUDE/o8comm.h:23: warning: unused variable `o8dd'
INCLUDE/o8comm.h:23: warning: unused variable `o8difx'
INCLUDE/o8comm.h:23: warning: unused variable `o8resmin'
INCLUDE/o8comm.h:25: warning: unused variable `o8gradf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gfn'
INCLUDE/o8comm.h:25: warning: unused variable `o8qgf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1'
INCLUDE/o8comm.h:26: warning: unused variable `o8gres'
INCLUDE/o8comm.h:26: warning: unused variable `o8gresn'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm1'
INCLUDE/o8comm.h:28: warning: unused variable `o8colno'
INCLUDE/o8comm.h:28: warning: unused variable `o8rank'
INCLUDE/o8comm.h:29: warning: unused variable `o8qr'
INCLUDE/o8comm.h:29: warning: unused variable `o8betaq'
INCLUDE/o8comm.h:29: warning: unused variable `o8diag'
INCLUDE/o8comm.h:30: warning: unused variable `o8cscal'
INCLUDE/o8comm.h:31: warning: unused variable `o8colle'
INCLUDE/o8comm.h:35: warning: unused variable `o8a'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2'
INCLUDE/o8comm.h:35: warning: unused variable `o8diag0'
INCLUDE/o8comm.h:35: warning: unused variable `o8matsc'
INCLUDE/o8comm.h:37: warning: unused variable `o8violis'
INCLUDE/o8comm.h:37: warning: unused variable `o8alist'
INCLUDE/o8comm.h:37: warning: unused variable `o8bind'
INCLUDE/o8comm.h:38: warning: unused variable `o8bind0'
INCLUDE/o8comm.h:38: warning: unused variable `o8aalist'
INCLUDE/o8comm.h:38: warning: unused variable `o8clist'
INCLUDE/o8comm.h:40: warning: unused variable `o8u'
INCLUDE/o8comm.h:40: warning: unused variable `o8u0'
INCLUDE/o8comm.h:41: warning: unused variable `o8w'
INCLUDE/o8comm.h:41: warning: unused variable `o8w1'
INCLUDE/o8comm.h:41: warning: unused variable `o8res'
INCLUDE/o8comm.h:42: warning: unused variable `o8res0'
INCLUDE/o8comm.h:42: warning: unused variable `o8res1'
INCLUDE/o8comm.h:43: warning: unused variable `o8resst'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf0'
INCLUDE/o8comm.h:44: warning: unused variable `o8yu'
INCLUDE/o8comm.h:44: warning: unused variable `o8slack'
INCLUDE/o8comm.h:44: warning: unused variable `o8infeas'
INCLUDE/o8comm.h:44: warning: unused variable `o8work'
INCLUDE/o8comm.h:47: warning: unused variable `o8del'
INCLUDE/o8comm.h:47: warning: unused variable `o8del0'
INCLUDE/o8comm.h:47: warning: unused variable `o8del01'
INCLUDE/o8comm.h:47: warning: unused variable `o8delmin'
INCLUDE/o8comm.h:47: warning: unused variable `o8tau0'
INCLUDE/o8comm.h:47: warning: unused variable `o8tau'
INCLUDE/o8comm.h:47: warning: unused variable `o8ny'
INCLUDE/o8comm.h:48: warning: unused variable `o8smalld'
INCLUDE/o8comm.h:48: warning: unused variable `o8smallw'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho1'
INCLUDE/o8comm.h:48: warning: unused variable `o8eta'
INCLUDE/o8comm.h:48: warning: unused variable `o8epsx'
INCLUDE/o8comm.h:48: warning: unused variable `o8c1d'
INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax'
INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0'
INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp'
INCLUDE/o8comm.h:49: warning: unused variable `o8taufac'
INCLUDE/o8comm.h:49: warning: unused variable `o8taumax'
INCLUDE/o8comm.h:51: warning: unused variable `o8alpha'
INCLUDE/o8comm.h:51: warning: unused variable `o8beta'
INCLUDE/o8comm.h:51: warning: unused variable `o8theta'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigla'
INCLUDE/o8comm.h:51: warning: unused variable `o8delta'
INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm'
INCLUDE/o8comm.h:52: warning: unused variable `o8delta1'
INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl'
INCLUDE/o8comm.h:54: warning: unused variable `o8level'
INCLUDE/o8comm.h:55: warning: unused variable `o8clow'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastup'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastch'
INCLUDE/o8comm.h:57: warning: unused variable `o8prou'
INCLUDE/o8comm.h:57: warning: unused variable `o8meu'
INCLUDE/o8comm.h:59: warning: unused variable `o8ug'
INCLUDE/o8comm.h:59: warning: unused variable `o8og'
INCLUDE/o8comm.h:61: warning: unused variable `o8low'
INCLUDE/o8comm.h:61: warning: unused variable `o8up'
INCLUDE/o8comm.h:61: warning: unused variable `o8big'
INCLUDE/o8comm.h:63: warning: unused variable `o8nreset'
INCLUDE/o8comm.h:65: warning: unused variable `o8xst'
INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi'
INCLUDE/o8fint.h:23: warning: unused variable `o8bloc'
INCLUDE/o8fint.h:23: warning: unused variable `o8valid'
INCLUDE/o8fint.h:23: warning: unused variable `o8corr'
INCLUDE/o8fint.h:24: warning: unused variable `o8difftype'
INCLUDE/o8fint.h:25: warning: unused variable `o8xtr'
INCLUDE/o8fint.h:25: warning: unused variable `o8xsc'
INCLUDE/o8fint.h:25: warning: unused variable `o8fu'
INCLUDE/o8fint.h:25: warning: unused variable `o8fugrad'
INCLUDE/o8fint.h:26: warning: unused variable `o8fud'
INCLUDE/o8fint.h:26: warning: unused variable `o8epsfcn'
INCLUDE/o8fint.h:26: warning: unused variable `o8taubnd'
INCLUDE/o8cons.h:4: warning: unused variable `o8zero'
INCLUDE/o8cons.h:4: warning: unused variable `o8one'
INCLUDE/o8cons.h:4: warning: unused variable `o8two'
INCLUDE/o8cons.h:4: warning: unused variable `o8three'
INCLUDE/o8cons.h:4: warning: unused variable `o8four'
INCLUDE/o8cons.h:5: warning: unused variable `o8five'
INCLUDE/o8cons.h:5: warning: unused variable `o8six'
INCLUDE/o8cons.h:5: warning: unused variable `o8seven'
INCLUDE/o8cons.h:6: warning: unused variable `o8twom2'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop4'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop11'
INCLUDE/o8cons.h:6: warning: unused variable `o8onep3'
INCLUDE/o8cons.h:7: warning: unused variable `o8onep5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p2'
INCLUDE/o8cons.h:7: warning: unused variable `o8p4'
INCLUDE/o8cons.h:7: warning: unused variable `o8p5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p7'
INCLUDE/o8cons.h:7: warning: unused variable `o8p8'
INCLUDE/o8cons.h:7: warning: unused variable `o8p9'
INCLUDE/o8cons.h:8: warning: unused variable `o8c45'
INCLUDE/o8cons.h:8: warning: unused variable `o8tm12'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm10'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm9'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm8'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm7'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm6'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm5'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm4'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm3'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm2'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp2'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp3'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp4'
optimize.c: In function `user_init':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te0'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te2'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te3'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls'
INCLUDE/o8comm.h:12: warning: unused variable `o8runtim'
INCLUDE/o8comm.h:13: warning: unused variable `o8optite'
INCLUDE/o8comm.h:14: warning: unused variable `o8accinf'
INCLUDE/o8comm.h:15: warning: unused variable `o8itstep'
INCLUDE/o8comm.h:15: warning: unused variable `o8phase'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsist'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi0'
INCLUDE/o8comm.h:18: warning: unused variable `o8psi1'
INCLUDE/o8comm.h:18: warning: unused variable `o8psist'
INCLUDE/o8comm.h:18: warning: unused variable `o8psimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi0'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi1'
INCLUDE/o8comm.h:19: warning: unused variable `o8phimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx0'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx1'
INCLUDE/o8comm.h:20: warning: unused variable `o8fxst'
INCLUDE/o8comm.h:20: warning: unused variable `o8fmin'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0'
INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm'
INCLUDE/o8comm.h:20: warning: unused variable `o8sig0'
INCLUDE/o8comm.h:20: warning: unused variable `o8dscal'
INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm'
INCLUDE/o8comm.h:21: warning: unused variable `o8sig'
INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin'
INCLUDE/o8comm.h:21: warning: unused variable `o8dirder'
INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi'
INCLUDE/o8comm.h:21: warning: unused variable `o8upsim'
INCLUDE/o8comm.h:22: warning: unused variable `o8x0'
INCLUDE/o8comm.h:22: warning: unused variable `o8x1'
INCLUDE/o8comm.h:22: warning: unused variable `o8xmin'
INCLUDE/o8comm.h:22: warning: unused variable `o8d'
INCLUDE/o8comm.h:22: warning: unused variable `o8d0'
INCLUDE/o8comm.h:23: warning: unused variable `o8dd'
INCLUDE/o8comm.h:23: warning: unused variable `o8difx'
INCLUDE/o8comm.h:23: warning: unused variable `o8resmin'
INCLUDE/o8comm.h:25: warning: unused variable `o8gradf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gfn'
INCLUDE/o8comm.h:25: warning: unused variable `o8qgf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1'
INCLUDE/o8comm.h:26: warning: unused variable `o8gresn'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm1'
INCLUDE/o8comm.h:28: warning: unused variable `o8colno'
INCLUDE/o8comm.h:28: warning: unused variable `o8rank'
INCLUDE/o8comm.h:29: warning: unused variable `o8qr'
INCLUDE/o8comm.h:29: warning: unused variable `o8betaq'
INCLUDE/o8comm.h:29: warning: unused variable `o8diag'
INCLUDE/o8comm.h:30: warning: unused variable `o8cscal'
INCLUDE/o8comm.h:31: warning: unused variable `o8colle'
INCLUDE/o8comm.h:35: warning: unused variable `o8a'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2'
INCLUDE/o8comm.h:35: warning: unused variable `o8diag0'
INCLUDE/o8comm.h:35: warning: unused variable `o8matsc'
INCLUDE/o8comm.h:37: warning: unused variable `o8violis'
INCLUDE/o8comm.h:37: warning: unused variable `o8alist'
INCLUDE/o8comm.h:37: warning: unused variable `o8bind'
INCLUDE/o8comm.h:38: warning: unused variable `o8bind0'
INCLUDE/o8comm.h:38: warning: unused variable `o8aalist'
INCLUDE/o8comm.h:38: warning: unused variable `o8clist'
INCLUDE/o8comm.h:40: warning: unused variable `o8u'
INCLUDE/o8comm.h:40: warning: unused variable `o8u0'
INCLUDE/o8comm.h:41: warning: unused variable `o8w'
INCLUDE/o8comm.h:41: warning: unused variable `o8w1'
INCLUDE/o8comm.h:41: warning: unused variable `o8res'
INCLUDE/o8comm.h:42: warning: unused variable `o8res0'
INCLUDE/o8comm.h:42: warning: unused variable `o8res1'
INCLUDE/o8comm.h:43: warning: unused variable `o8resst'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf0'
INCLUDE/o8comm.h:44: warning: unused variable `o8yu'
INCLUDE/o8comm.h:44: warning: unused variable `o8slack'
INCLUDE/o8comm.h:44: warning: unused variable `o8infeas'
INCLUDE/o8comm.h:44: warning: unused variable `o8work'
INCLUDE/o8comm.h:47: warning: unused variable `o8del'
INCLUDE/o8comm.h:47: warning: unused variable `o8del01'
INCLUDE/o8comm.h:47: warning: unused variable `o8delmin'
INCLUDE/o8comm.h:47: warning: unused variable `o8ny'
INCLUDE/o8comm.h:48: warning: unused variable `o8smalld'
INCLUDE/o8comm.h:48: warning: unused variable `o8smallw'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho1'
INCLUDE/o8comm.h:48: warning: unused variable `o8eta'
INCLUDE/o8comm.h:48: warning: unused variable `o8epsx'
INCLUDE/o8comm.h:48: warning: unused variable `o8c1d'
INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax'
INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0'
INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp'
INCLUDE/o8comm.h:49: warning: unused variable `o8taufac'
INCLUDE/o8comm.h:49: warning: unused variable `o8taumax'
INCLUDE/o8comm.h:51: warning: unused variable `o8alpha'
INCLUDE/o8comm.h:51: warning: unused variable `o8beta'
INCLUDE/o8comm.h:51: warning: unused variable `o8theta'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigla'
INCLUDE/o8comm.h:51: warning: unused variable `o8delta'
INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm'
INCLUDE/o8comm.h:52: warning: unused variable `o8delta1'
INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl'
INCLUDE/o8comm.h:54: warning: unused variable `o8level'
INCLUDE/o8comm.h:55: warning: unused variable `o8clow'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastup'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastch'
INCLUDE/o8comm.h:57: warning: unused variable `o8prou'
INCLUDE/o8comm.h:57: warning: unused variable `o8meu'
INCLUDE/o8comm.h:59: warning: unused variable `o8ug'
INCLUDE/o8comm.h:59: warning: unused variable `o8og'
INCLUDE/o8comm.h:65: warning: unused variable `o8xst'
INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi'
INCLUDE/o8fint.h:23: warning: unused variable `o8bloc'
INCLUDE/o8fint.h:23: warning: unused variable `o8valid'
INCLUDE/o8fint.h:23: warning: unused variable `o8corr'
INCLUDE/o8fint.h:25: warning: unused variable `o8xtr'
INCLUDE/o8fint.h:25: warning: unused variable `o8xsc'
INCLUDE/o8fint.h:25: warning: unused variable `o8fu'
INCLUDE/o8fint.h:25: warning: unused variable `o8fugrad'
INCLUDE/o8fint.h:26: warning: unused variable `o8fud'
INCLUDE/o8cons.h:4: warning: unused variable `o8zero'
INCLUDE/o8cons.h:4: warning: unused variable `o8one'
INCLUDE/o8cons.h:4: warning: unused variable `o8two'
INCLUDE/o8cons.h:4: warning: unused variable `o8three'
INCLUDE/o8cons.h:4: warning: unused variable `o8four'
INCLUDE/o8cons.h:5: warning: unused variable `o8five'
INCLUDE/o8cons.h:5: warning: unused variable `o8six'
INCLUDE/o8cons.h:5: warning: unused variable `o8seven'
INCLUDE/o8cons.h:6: warning: unused variable `o8twom2'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop4'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop11'
INCLUDE/o8cons.h:6: warning: unused variable `o8onep3'
INCLUDE/o8cons.h:7: warning: unused variable `o8onep5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p2'
INCLUDE/o8cons.h:7: warning: unused variable `o8p4'
INCLUDE/o8cons.h:7: warning: unused variable `o8p5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p7'
INCLUDE/o8cons.h:7: warning: unused variable `o8p8'
INCLUDE/o8cons.h:7: warning: unused variable `o8p9'
INCLUDE/o8cons.h:8: warning: unused variable `o8c45'
INCLUDE/o8cons.h:8: warning: unused variable `o8tm12'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm10'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm9'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm8'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm7'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm6'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm5'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm4'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm3'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm2'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp2'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp3'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp4'
optimize.c: In function `setup':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
INCLUDE/o8comm.h:12: warning: unused variable `o8runtim'
INCLUDE/o8comm.h:13: warning: unused variable `o8optite'
INCLUDE/o8comm.h:14: warning: unused variable `o8accinf'
INCLUDE/o8comm.h:15: warning: unused variable `o8itstep'
INCLUDE/o8comm.h:15: warning: unused variable `o8phase'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsist'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi0'
INCLUDE/o8comm.h:18: warning: unused variable `o8psi1'
INCLUDE/o8comm.h:18: warning: unused variable `o8psist'
INCLUDE/o8comm.h:18: warning: unused variable `o8psimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi0'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi1'
INCLUDE/o8comm.h:19: warning: unused variable `o8phimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx0'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx1'
INCLUDE/o8comm.h:20: warning: unused variable `o8fxst'
INCLUDE/o8comm.h:20: warning: unused variable `o8fmin'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0'
INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm'
INCLUDE/o8comm.h:20: warning: unused variable `o8sig0'
INCLUDE/o8comm.h:20: warning: unused variable `o8dscal'
INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm'
INCLUDE/o8comm.h:21: warning: unused variable `o8sig'
INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin'
INCLUDE/o8comm.h:21: warning: unused variable `o8dirder'
INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi'
INCLUDE/o8comm.h:21: warning: unused variable `o8upsim'
INCLUDE/o8comm.h:22: warning: unused variable `o8x0'
INCLUDE/o8comm.h:22: warning: unused variable `o8x1'
INCLUDE/o8comm.h:22: warning: unused variable `o8xmin'
INCLUDE/o8comm.h:22: warning: unused variable `o8d'
INCLUDE/o8comm.h:22: warning: unused variable `o8d0'
INCLUDE/o8comm.h:23: warning: unused variable `o8dd'
INCLUDE/o8comm.h:23: warning: unused variable `o8difx'
INCLUDE/o8comm.h:23: warning: unused variable `o8resmin'
INCLUDE/o8comm.h:25: warning: unused variable `o8gradf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gfn'
INCLUDE/o8comm.h:25: warning: unused variable `o8qgf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1'
INCLUDE/o8comm.h:26: warning: unused variable `o8gresn'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm1'
INCLUDE/o8comm.h:28: warning: unused variable `o8colno'
INCLUDE/o8comm.h:28: warning: unused variable `o8rank'
INCLUDE/o8comm.h:29: warning: unused variable `o8qr'
INCLUDE/o8comm.h:29: warning: unused variable `o8betaq'
INCLUDE/o8comm.h:29: warning: unused variable `o8diag'
INCLUDE/o8comm.h:30: warning: unused variable `o8cscal'
INCLUDE/o8comm.h:31: warning: unused variable `o8colle'
INCLUDE/o8comm.h:35: warning: unused variable `o8a'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2'
INCLUDE/o8comm.h:35: warning: unused variable `o8diag0'
INCLUDE/o8comm.h:35: warning: unused variable `o8matsc'
INCLUDE/o8comm.h:37: warning: unused variable `o8violis'
INCLUDE/o8comm.h:37: warning: unused variable `o8alist'
INCLUDE/o8comm.h:37: warning: unused variable `o8bind'
INCLUDE/o8comm.h:38: warning: unused variable `o8bind0'
INCLUDE/o8comm.h:38: warning: unused variable `o8aalist'
INCLUDE/o8comm.h:38: warning: unused variable `o8clist'
INCLUDE/o8comm.h:40: warning: unused variable `o8u'
INCLUDE/o8comm.h:40: warning: unused variable `o8u0'
INCLUDE/o8comm.h:41: warning: unused variable `o8w'
INCLUDE/o8comm.h:41: warning: unused variable `o8w1'
INCLUDE/o8comm.h:41: warning: unused variable `o8res'
INCLUDE/o8comm.h:42: warning: unused variable `o8res0'
INCLUDE/o8comm.h:42: warning: unused variable `o8res1'
INCLUDE/o8comm.h:43: warning: unused variable `o8resst'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf0'
INCLUDE/o8comm.h:44: warning: unused variable `o8yu'
INCLUDE/o8comm.h:44: warning: unused variable `o8slack'
INCLUDE/o8comm.h:44: warning: unused variable `o8infeas'
INCLUDE/o8comm.h:44: warning: unused variable `o8work'
INCLUDE/o8comm.h:47: warning: unused variable `o8del'
INCLUDE/o8comm.h:47: warning: unused variable `o8del01'
INCLUDE/o8comm.h:47: warning: unused variable `o8delmin'
INCLUDE/o8comm.h:47: warning: unused variable `o8ny'
INCLUDE/o8comm.h:48: warning: unused variable `o8smalld'
INCLUDE/o8comm.h:48: warning: unused variable `o8smallw'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho1'
INCLUDE/o8comm.h:48: warning: unused variable `o8eta'
INCLUDE/o8comm.h:48: warning: unused variable `o8epsx'
INCLUDE/o8comm.h:48: warning: unused variable `o8c1d'
INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax'
INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0'
INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp'
INCLUDE/o8comm.h:49: warning: unused variable `o8taufac'
INCLUDE/o8comm.h:49: warning: unused variable `o8taumax'
INCLUDE/o8comm.h:51: warning: unused variable `o8alpha'
INCLUDE/o8comm.h:51: warning: unused variable `o8beta'
INCLUDE/o8comm.h:51: warning: unused variable `o8theta'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigla'
INCLUDE/o8comm.h:51: warning: unused variable `o8delta'
INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm'
INCLUDE/o8comm.h:52: warning: unused variable `o8delta1'
INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl'
INCLUDE/o8comm.h:54: warning: unused variable `o8level'
INCLUDE/o8comm.h:55: warning: unused variable `o8clow'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastup'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastch'
INCLUDE/o8comm.h:57: warning: unused variable `o8prou'
INCLUDE/o8comm.h:57: warning: unused variable `o8meu'
INCLUDE/o8comm.h:59: warning: unused variable `o8ug'
INCLUDE/o8comm.h:59: warning: unused variable `o8og'
INCLUDE/o8comm.h:65: warning: unused variable `o8xst'
INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi'
optimize.c: In function `solchk':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
INCLUDE/o8comm.h:12: warning: unused variable `o8runtim'
INCLUDE/o8comm.h:14: warning: unused variable `o8accinf'
INCLUDE/o8comm.h:15: warning: unused variable `o8phase'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsist'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi0'
INCLUDE/o8comm.h:18: warning: unused variable `o8psi1'
INCLUDE/o8comm.h:18: warning: unused variable `o8psist'
INCLUDE/o8comm.h:18: warning: unused variable `o8psimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi0'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi1'
INCLUDE/o8comm.h:19: warning: unused variable `o8phimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx0'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx1'
INCLUDE/o8comm.h:20: warning: unused variable `o8fxst'
INCLUDE/o8comm.h:20: warning: unused variable `o8fmin'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0'
INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm'
INCLUDE/o8comm.h:20: warning: unused variable `o8sig0'
INCLUDE/o8comm.h:20: warning: unused variable `o8dscal'
INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm'
INCLUDE/o8comm.h:21: warning: unused variable `o8sig'
INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin'
INCLUDE/o8comm.h:21: warning: unused variable `o8dirder'
INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi'
INCLUDE/o8comm.h:21: warning: unused variable `o8upsim'
INCLUDE/o8comm.h:22: warning: unused variable `o8x0'
INCLUDE/o8comm.h:22: warning: unused variable `o8x1'
INCLUDE/o8comm.h:22: warning: unused variable `o8xmin'
INCLUDE/o8comm.h:22: warning: unused variable `o8d'
INCLUDE/o8comm.h:22: warning: unused variable `o8d0'
INCLUDE/o8comm.h:23: warning: unused variable `o8dd'
INCLUDE/o8comm.h:23: warning: unused variable `o8difx'
INCLUDE/o8comm.h:23: warning: unused variable `o8resmin'
INCLUDE/o8comm.h:25: warning: unused variable `o8gradf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gfn'
INCLUDE/o8comm.h:25: warning: unused variable `o8qgf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1'
INCLUDE/o8comm.h:26: warning: unused variable `o8gresn'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm1'
INCLUDE/o8comm.h:28: warning: unused variable `o8colno'
INCLUDE/o8comm.h:28: warning: unused variable `o8rank'
INCLUDE/o8comm.h:29: warning: unused variable `o8qr'
INCLUDE/o8comm.h:29: warning: unused variable `o8betaq'
INCLUDE/o8comm.h:29: warning: unused variable `o8diag'
INCLUDE/o8comm.h:30: warning: unused variable `o8cscal'
INCLUDE/o8comm.h:31: warning: unused variable `o8colle'
INCLUDE/o8comm.h:35: warning: unused variable `o8a'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2'
INCLUDE/o8comm.h:35: warning: unused variable `o8diag0'
INCLUDE/o8comm.h:35: warning: unused variable `o8matsc'
INCLUDE/o8comm.h:37: warning: unused variable `o8violis'
INCLUDE/o8comm.h:37: warning: unused variable `o8alist'
INCLUDE/o8comm.h:37: warning: unused variable `o8bind'
INCLUDE/o8comm.h:38: warning: unused variable `o8bind0'
INCLUDE/o8comm.h:38: warning: unused variable `o8aalist'
INCLUDE/o8comm.h:38: warning: unused variable `o8clist'
INCLUDE/o8comm.h:40: warning: unused variable `o8u'
INCLUDE/o8comm.h:40: warning: unused variable `o8u0'
INCLUDE/o8comm.h:41: warning: unused variable `o8w'
INCLUDE/o8comm.h:41: warning: unused variable `o8w1'
INCLUDE/o8comm.h:41: warning: unused variable `o8res'
INCLUDE/o8comm.h:42: warning: unused variable `o8res0'
INCLUDE/o8comm.h:42: warning: unused variable `o8res1'
INCLUDE/o8comm.h:43: warning: unused variable `o8resst'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf0'
INCLUDE/o8comm.h:44: warning: unused variable `o8yu'
INCLUDE/o8comm.h:44: warning: unused variable `o8slack'
INCLUDE/o8comm.h:44: warning: unused variable `o8infeas'
INCLUDE/o8comm.h:44: warning: unused variable `o8work'
INCLUDE/o8comm.h:47: warning: unused variable `o8del'
INCLUDE/o8comm.h:47: warning: unused variable `o8del01'
INCLUDE/o8comm.h:47: warning: unused variable `o8delmin'
INCLUDE/o8comm.h:47: warning: unused variable `o8ny'
INCLUDE/o8comm.h:48: warning: unused variable `o8smalld'
INCLUDE/o8comm.h:48: warning: unused variable `o8smallw'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho1'
INCLUDE/o8comm.h:48: warning: unused variable `o8eta'
INCLUDE/o8comm.h:48: warning: unused variable `o8epsx'
INCLUDE/o8comm.h:48: warning: unused variable `o8c1d'
INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax'
INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0'
INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp'
INCLUDE/o8comm.h:49: warning: unused variable `o8taufac'
INCLUDE/o8comm.h:49: warning: unused variable `o8taumax'
INCLUDE/o8comm.h:51: warning: unused variable `o8alpha'
INCLUDE/o8comm.h:51: warning: unused variable `o8beta'
INCLUDE/o8comm.h:51: warning: unused variable `o8theta'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigla'
INCLUDE/o8comm.h:51: warning: unused variable `o8delta'
INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm'
INCLUDE/o8comm.h:52: warning: unused variable `o8delta1'
INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl'
INCLUDE/o8comm.h:54: warning: unused variable `o8level'
INCLUDE/o8comm.h:55: warning: unused variable `o8clow'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastup'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastch'
INCLUDE/o8comm.h:57: warning: unused variable `o8prou'
INCLUDE/o8comm.h:57: warning: unused variable `o8meu'
INCLUDE/o8comm.h:59: warning: unused variable `o8ug'
INCLUDE/o8comm.h:59: warning: unused variable `o8og'
INCLUDE/o8comm.h:65: warning: unused variable `o8xst'
INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi'
INCLUDE/o8cons.h:4: warning: unused variable `o8zero'
INCLUDE/o8cons.h:4: warning: unused variable `o8one'
INCLUDE/o8cons.h:4: warning: unused variable `o8two'
INCLUDE/o8cons.h:4: warning: unused variable `o8three'
INCLUDE/o8cons.h:4: warning: unused variable `o8four'
INCLUDE/o8cons.h:5: warning: unused variable `o8five'
INCLUDE/o8cons.h:5: warning: unused variable `o8six'
INCLUDE/o8cons.h:5: warning: unused variable `o8seven'
INCLUDE/o8cons.h:6: warning: unused variable `o8twom2'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop4'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop11'
INCLUDE/o8cons.h:6: warning: unused variable `o8onep3'
INCLUDE/o8cons.h:7: warning: unused variable `o8onep5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p2'
INCLUDE/o8cons.h:7: warning: unused variable `o8p4'
INCLUDE/o8cons.h:7: warning: unused variable `o8p5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p7'
INCLUDE/o8cons.h:7: warning: unused variable `o8p8'
INCLUDE/o8cons.h:7: warning: unused variable `o8p9'
INCLUDE/o8cons.h:8: warning: unused variable `o8c45'
INCLUDE/o8cons.h:8: warning: unused variable `o8tm12'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm10'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm9'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm8'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm7'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm6'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm5'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm4'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm3'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm2'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp2'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp3'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp4'
optimize.c: In function `ef':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
optimize.c: In function `egradf':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
optimize.c: In function `econ':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
optimize.c: In function `econgrad':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c posterior.c -o posterior.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c precalc.c -o precalc.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c rio.c -o rio.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c theta.c -o theta.o
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c user_eval.c -o user_eval.o
user_eval.c: In function `user_eval':
INCLUDE/o8fuco.h:5: warning: unused variable `o8val'
INCLUDE/o8fuco.h:5: warning: unused variable `o8llow'
INCLUDE/o8fuco.h:5: warning: unused variable `o8lup'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nr'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nres'
INCLUDE/o8fuco.h:7: warning: unused variable `o8nstep'
INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm'
INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm'
INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac'
INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac'
INCLUDE/o8fuco.h:11: warning: unused variable `o8name'
INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif'
INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te0'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te1'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te2'
INCLUDE/o8fuco.h:15: warning: unused variable `o8te3'
INCLUDE/o8fuco.h:15: warning: unused variable `o8singul'
INCLUDE/o8fuco.h:16: warning: unused variable `o8ident'
INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres'
INCLUDE/o8fuco.h:16: warning: unused variable `o8silent'
INCLUDE/o8fuco.h:16: warning: unused variable `o8cold'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cres'
INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres'
INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr'
INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr'
INCLUDE/o8fuco.h:25: warning: unused variable `o8nh'
INCLUDE/o8fuco.h:25: warning: unused variable `o8ng'
INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist'
INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit'
INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst'
INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr'
INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls'
INCLUDE/o8comm.h:12: warning: unused variable `o8runtim'
INCLUDE/o8comm.h:13: warning: unused variable `o8optite'
INCLUDE/o8comm.h:14: warning: unused variable `o8accinf'
INCLUDE/o8comm.h:15: warning: unused variable `o8itstep'
INCLUDE/o8comm.h:15: warning: unused variable `o8phase'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1'
INCLUDE/o8comm.h:17: warning: unused variable `o8upsist'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi'
INCLUDE/o8comm.h:17: warning: unused variable `o8psi0'
INCLUDE/o8comm.h:18: warning: unused variable `o8psi1'
INCLUDE/o8comm.h:18: warning: unused variable `o8psist'
INCLUDE/o8comm.h:18: warning: unused variable `o8psimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi0'
INCLUDE/o8comm.h:19: warning: unused variable `o8phi1'
INCLUDE/o8comm.h:19: warning: unused variable `o8phimin'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx0'
INCLUDE/o8comm.h:19: warning: unused variable `o8fx1'
INCLUDE/o8comm.h:20: warning: unused variable `o8fxst'
INCLUDE/o8comm.h:20: warning: unused variable `o8fmin'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n'
INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0'
INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm'
INCLUDE/o8comm.h:20: warning: unused variable `o8sig0'
INCLUDE/o8comm.h:20: warning: unused variable `o8dscal'
INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm'
INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm'
INCLUDE/o8comm.h:21: warning: unused variable `o8sig'
INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin'
INCLUDE/o8comm.h:21: warning: unused variable `o8dirder'
INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi'
INCLUDE/o8comm.h:21: warning: unused variable `o8upsim'
INCLUDE/o8comm.h:22: warning: unused variable `o8x'
INCLUDE/o8comm.h:22: warning: unused variable `o8x0'
INCLUDE/o8comm.h:22: warning: unused variable `o8x1'
INCLUDE/o8comm.h:22: warning: unused variable `o8xmin'
INCLUDE/o8comm.h:22: warning: unused variable `o8d'
INCLUDE/o8comm.h:22: warning: unused variable `o8d0'
INCLUDE/o8comm.h:23: warning: unused variable `o8dd'
INCLUDE/o8comm.h:23: warning: unused variable `o8difx'
INCLUDE/o8comm.h:23: warning: unused variable `o8resmin'
INCLUDE/o8comm.h:25: warning: unused variable `o8gradf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gfn'
INCLUDE/o8comm.h:25: warning: unused variable `o8qgf'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0'
INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1'
INCLUDE/o8comm.h:26: warning: unused variable `o8gres'
INCLUDE/o8comm.h:26: warning: unused variable `o8gresn'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm'
INCLUDE/o8comm.h:28: warning: unused variable `o8perm1'
INCLUDE/o8comm.h:28: warning: unused variable `o8colno'
INCLUDE/o8comm.h:28: warning: unused variable `o8rank'
INCLUDE/o8comm.h:29: warning: unused variable `o8qr'
INCLUDE/o8comm.h:29: warning: unused variable `o8betaq'
INCLUDE/o8comm.h:29: warning: unused variable `o8diag'
INCLUDE/o8comm.h:30: warning: unused variable `o8cscal'
INCLUDE/o8comm.h:31: warning: unused variable `o8colle'
INCLUDE/o8comm.h:35: warning: unused variable `o8a'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm'
INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2'
INCLUDE/o8comm.h:35: warning: unused variable `o8diag0'
INCLUDE/o8comm.h:35: warning: unused variable `o8matsc'
INCLUDE/o8comm.h:37: warning: unused variable `o8violis'
INCLUDE/o8comm.h:37: warning: unused variable `o8alist'
INCLUDE/o8comm.h:37: warning: unused variable `o8bind'
INCLUDE/o8comm.h:38: warning: unused variable `o8bind0'
INCLUDE/o8comm.h:38: warning: unused variable `o8aalist'
INCLUDE/o8comm.h:38: warning: unused variable `o8clist'
INCLUDE/o8comm.h:40: warning: unused variable `o8u'
INCLUDE/o8comm.h:40: warning: unused variable `o8u0'
INCLUDE/o8comm.h:41: warning: unused variable `o8w'
INCLUDE/o8comm.h:41: warning: unused variable `o8w1'
INCLUDE/o8comm.h:41: warning: unused variable `o8res'
INCLUDE/o8comm.h:42: warning: unused variable `o8res0'
INCLUDE/o8comm.h:42: warning: unused variable `o8res1'
INCLUDE/o8comm.h:43: warning: unused variable `o8resst'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf'
INCLUDE/o8comm.h:43: warning: unused variable `o8scf0'
INCLUDE/o8comm.h:44: warning: unused variable `o8yu'
INCLUDE/o8comm.h:44: warning: unused variable `o8slack'
INCLUDE/o8comm.h:44: warning: unused variable `o8infeas'
INCLUDE/o8comm.h:44: warning: unused variable `o8work'
INCLUDE/o8comm.h:46: warning: unused variable `o8iterma'
INCLUDE/o8comm.h:47: warning: unused variable `o8del'
INCLUDE/o8comm.h:47: warning: unused variable `o8del0'
INCLUDE/o8comm.h:47: warning: unused variable `o8del01'
INCLUDE/o8comm.h:47: warning: unused variable `o8delmin'
INCLUDE/o8comm.h:47: warning: unused variable `o8tau0'
INCLUDE/o8comm.h:47: warning: unused variable `o8tau'
INCLUDE/o8comm.h:47: warning: unused variable `o8ny'
INCLUDE/o8comm.h:48: warning: unused variable `o8smalld'
INCLUDE/o8comm.h:48: warning: unused variable `o8smallw'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho'
INCLUDE/o8comm.h:48: warning: unused variable `o8rho1'
INCLUDE/o8comm.h:48: warning: unused variable `o8eta'
INCLUDE/o8comm.h:48: warning: unused variable `o8epsx'
INCLUDE/o8comm.h:48: warning: unused variable `o8c1d'
INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax'
INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0'
INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp'
INCLUDE/o8comm.h:49: warning: unused variable `o8taufac'
INCLUDE/o8comm.h:49: warning: unused variable `o8taumax'
INCLUDE/o8comm.h:51: warning: unused variable `o8alpha'
INCLUDE/o8comm.h:51: warning: unused variable `o8beta'
INCLUDE/o8comm.h:51: warning: unused variable `o8theta'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm'
INCLUDE/o8comm.h:51: warning: unused variable `o8sigla'
INCLUDE/o8comm.h:51: warning: unused variable `o8delta'
INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm'
INCLUDE/o8comm.h:52: warning: unused variable `o8delta1'
INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl'
INCLUDE/o8comm.h:54: warning: unused variable `o8level'
INCLUDE/o8comm.h:55: warning: unused variable `o8clow'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastup'
INCLUDE/o8comm.h:55: warning: unused variable `o8lastch'
INCLUDE/o8comm.h:57: warning: unused variable `o8prou'
INCLUDE/o8comm.h:57: warning: unused variable `o8meu'
INCLUDE/o8comm.h:59: warning: unused variable `o8ug'
INCLUDE/o8comm.h:59: warning: unused variable `o8og'
INCLUDE/o8comm.h:61: warning: unused variable `o8low'
INCLUDE/o8comm.h:61: warning: unused variable `o8up'
INCLUDE/o8comm.h:61: warning: unused variable `o8big'
INCLUDE/o8comm.h:63: warning: unused variable `o8nreset'
INCLUDE/o8comm.h:65: warning: unused variable `o8xst'
INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi'
INCLUDE/o8fint.h:23: warning: unused variable `o8bloc'
INCLUDE/o8fint.h:23: warning: unused variable `o8corr'
INCLUDE/o8cons.h:4: warning: unused variable `o8two'
INCLUDE/o8cons.h:5: warning: unused variable `o8five'
INCLUDE/o8cons.h:5: warning: unused variable `o8six'
INCLUDE/o8cons.h:6: warning: unused variable `o8twom2'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop4'
INCLUDE/o8cons.h:6: warning: unused variable `o8twop11'
INCLUDE/o8cons.h:6: warning: unused variable `o8onep3'
INCLUDE/o8cons.h:7: warning: unused variable `o8onep5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p2'
INCLUDE/o8cons.h:7: warning: unused variable `o8p5'
INCLUDE/o8cons.h:7: warning: unused variable `o8p7'
INCLUDE/o8cons.h:7: warning: unused variable `o8p8'
INCLUDE/o8cons.h:7: warning: unused variable `o8p9'
INCLUDE/o8cons.h:8: warning: unused variable `o8tm12'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm10'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm9'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm8'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm7'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm6'
INCLUDE/o8cons.h:9: warning: unused variable `o8tm5'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm4'
INCLUDE/o8cons.h:10: warning: unused variable `o8tm3'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp1'
INCLUDE/o8cons.h:10: warning: unused variable `o8tp2'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp3'
INCLUDE/o8cons.h:11: warning: unused variable `o8tp4'
gcc  -IINCLUDE -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99   -c xml.c -o xml.o
windres --include-dir e:/biocbld/2.0d/R/include  -i cosmo_res.rc -o cosmo_res.o
gcc  -shared -s  -o cosmo.dll cosmo.def alloc.o back.o constraints.o cosmo.o cregistration.o donlp2.o estarts.o eval.o fit.o free.o init.o io.o lstarts.o matLib.o newx.o optimize.o posterior.o precalc.o rio.o theta.o user_eval.o xml.o cosmo_res.o  -Le:/biocbld/2.0d/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'cosmo'
     Formats: text html latex example chm 
  addCon                            text    html    latex   example chm
  align-class                       text    html    latex   example chm
  boundCon-class                    text    html    latex   example chm
  constraintBuilder                 text    html    latex   example chm
  constraintSet-class               text    html    latex   example chm
  cosmo-class                       text    html    latex   example chm
  cosmo                             text    html    latex   example chm
  intInfo-class                     text    html    latex   example chm
  license.cosmo                     text    html    latex   example chm
  makeBoundCon                      text    html    latex   example chm
  makeConSet                        text    html    latex   example chm
  makePWM                           text    html    latex   example chm
  makePalCon                        text    html    latex   example chm
  makePosFreqCon                    text    html    latex   example chm
  makeShapeCon                      text    html    latex   example chm
  makeShapeDiffCon                  text    html    latex   example chm
  makeSubMotifCon                   text    html    latex   example chm
  motifPWM                          text    html    latex   example chm
  palCon-class                      text    html    latex   example chm
  posFreqCon-class                  text    html    latex   example chm
  postProbs-class                   text    html    latex   example chm
  pwm-class                         text    html    latex   example chm
  readConFile                       text    html    latex   example chm
  rseq                              text    html    latex   example chm
  seqLogo                           text    html    latex   example chm
  shapeCon-class                    text    html    latex   example chm
  shapeDiffCon-class                text    html    latex   example chm
  simScore                          text    html    latex   example chm
  subMotifCon-class                 text    html    latex   example chm
  transMats                         text    html    latex   example chm
  writeConFile                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\2.0d\Rpacks\cosmo\chm\cosmo.chm





Compile time: 0 minutes, 0 seconds

32	Topics

183	Local links

0	Internet links

1	Graphic





Created e:\biocbld\2.0d\Rpacks\cosmo\chm\cosmo.chm, 53,016 bytes

Compression decreased file by 61,944 bytes.

  preparing package cosmo for lazy loading
Loading required package: grid
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: DynDoc
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Creating a new generic function for "plot" in "cosmo"
Creating a new generic function for "print" in "cosmo"
  adding MD5 sums

* DONE (cosmo)
* creating vignettes ... ERROR
Loading required package: grid
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: DynDoc
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

entering extended mode
pdflatex.EXE: Windows API error 5: Access is denied.

texify: pdflatex failed for some reason (see log file).
Error in texi2dvi(file = bft, pdf = TRUE, clean = FALSE, quiet = quiet) : 
	running texi2dvi on 'cosmo.tex' failed
Execution halted