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ecolitk

1.7.1

Laurent
Linux (SUSE 9.2) x86_64[ ERROR ]skipped
Linux (SUSE 10.1) x86_64 ERROR skipped
Linux (SUSE 9.2) i686 ERROR skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 ERROR skippedskipped
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 ERROR skipped
Package: ecolitk
Version: 1.7.1
Command: /loc/biocbuild/2.0d/R/bin/R CMD build ecolitk
RetCode: 1
Time: 21.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'ecolitk/DESCRIPTION' ... OK
* preparing 'ecolitk':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'ecolitk' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'ecolitk'
     Formats: text html latex example 
  ecoli.data                        text    html    latex   example
  ecoligenome.operon                text    html    latex   example
  ecoligenomeBNUM                   text    html    latex
  ecoligenomeBNUM2MULTIFUN          text    html    latex
  gccontent                         text    html    latex
  linkedmultiget                    text    html    latex   example
  multiFun                          text    html    latex   example
  pointsCircle                      text    html    latex   example
  polar2xy                          text    html    latex   example
  polygonChrom                      text    html    latex   example
  wstringapply                      text    html    latex   example
** building package indices ...
* DONE (ecolitk)
* creating vignettes ... ERROR
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affyio
Loading required package: ecoliLeucine
Loading required package: ecolicdf
There were 14 warnings (use warnings() to see them)

Error:  chunk 14 
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Error in buildVignettes(dir = ".") : Error:  chunk 14 
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Execution halted