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annaffy

1.6.2

Colin A. Smith
Last Changed Date: 2007-02-20 02:45:34 -0800
Last Changed Rev: 22707
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 x86_64  OK [ OK ] OK 
Package: annaffy
Version: 1.6.2
Command: D:\biocbld\bbs-1.9\R\bin\R.exe CMD check annaffy_1.6.2.tar.gz
RetCode: 0
Time: 225.4 seconds
Status: OK
CheckDir: annaffy.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-1.9/meat/annaffy.Rcheck'
* using R version 2.4.1 (2006-12-18)
* checking for file 'annaffy/DESCRIPTION' ... OK
* this is package 'annaffy' version '1.6.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'annaffy' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating annaffy-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating annaffy-manual.tex ... OK
* checking annaffy-manual.tex ... OK

annaffy.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-1.9/meat/annaffy.Rcheck


---------- Making package annaffy ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: GO
Loading required package: KEGG
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'annaffy'
     Formats: text html latex example chm 
  aaf.character                     text    html    latex           chm
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  getURL-methods                    text    html    latex           chm
  is.annpkg                         text    html    latex   example chm
  selectorWidget                    text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-1.9\meat\annaffy.Rcheck\00_pkg_src\annaffy\chm\annaffy.chm


Compile time: 0 minutes, 0 seconds
53	Topics
306	Local links
5	Internet links
1	Graphic


Created d:\biocbld\bbs-1.9\meat\annaffy.Rcheck\00_pkg_src\annaffy\chm\annaffy.chm, 47,390 bytes
Compression decreased file by 101,302 bytes.
  adding MD5 sums

* DONE (annaffy)