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affycoretools

1.6.1

James W. MacDonald
Last Changed Date: 2007-02-07 08:23:35 -0800
Last Changed Rev: 22464
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 x86_64  OK  OK [ OK ]
Package: affycoretools
Version: 1.6.1
Command: D:\biocbld\bbs-1.9\R\bin\R.exe CMD INSTALL --build --library=affycoretools.instdir affycoretools_1.6.1.tar.gz
RetCode: 0
Time: 17.0 seconds
Status: OK
PackageFile: affycoretools_1.6.1.zip

Command output

installing R.css in D:/biocbld/bbs-1.9/meat/affycoretools.instdir

Using auto-selected zip options ' affycoretools-HELP=ziponly'

---------- Making package affycoretools ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'affycoretools'
     Formats: text html latex example chm 
  affystart                         text    html    latex           chm
  annBM                             text    html    latex   example chm
  convert.back                      text    html    latex           chm
  foldFilt                          text    html    latex           chm
  foldFiltBM                        text    html    latex           chm
  getCols                           text    html    latex           chm
  getIndex                          text    html    latex           chm
  getSymbol                         text    html    latex           chm
  getans                            text    html    latex           chm
  hyperG2annaffy                    text    html    latex           chm
  intNames                          text    html    latex           chm
  limma2annaffy                     text    html    latex           chm
  limma2biomaRt                     text    html    latex           chm
  make.cl                           text    html    latex           chm
  makeIndices                       text    html    latex           chm
  pca.legend                        text    html    latex           chm
  plotDeg                           text    html    latex   example chm
  plotMA                            text    html    latex           chm
  plotPCA                           text    html    latex           chm
  probes2table                      text    html    latex           chm
  probes2tableBM                    text    html    latex           chm
  tableFilt                         text    html    latex           chm
  vennCounts2                       text    html    latex   example chm
  vennSelect                        text    html    latex           chm
  vennSelectBM                      text    html    latex           chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-1.9\meat\R.INSTALL\affycoretools\chm\affycoretools.chm





Compile time: 0 minutes, 0 seconds

26	Topics

43	Local links

0	Internet links

1	Graphic





Created d:\biocbld\bbs-1.9\meat\R.INSTALL\affycoretools\chm\affycoretools.chm, 52,656 bytes

Compression decreased file by 55,935 bytes.

  preparing package affycoretools for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affyio
Loading required package: limma
Loading required package: GOstats
Loading required package: graph
Loading required package: GO
Loading required package: annotate
Loading required package: RBGL
Loading required package: Category
Loading required package: KEGG
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: biomaRt
Loading required package: XML

Attaching package: 'XML'


	The following object(s) are masked from package:graph :

	 addNode 

Loading required package: RCurl

Attaching package: 'biomaRt'


	The following object(s) are masked from package:annotate :

	 getGO 

  adding MD5 sums

packaged installation of package 'affycoretools' as affycoretools_1.6.1.zip
* DONE (affycoretools)