Back to Multiple platform build/check report

Package: twilight
Version: 1.8.0
Command: /home/biocbuild/arch/sparc/R-2.3.0/bin/R CMD build twilight
RetCode: 1
Time: 52.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'twilight/DESCRIPTION' ... OK
* preparing 'twilight':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... OK
* installing the package to re-build vignettes
* Installing *source* package 'twilight' ...
** libs
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c confidence.line.c -o confidence.line.o
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c correlation.c -o correlation.o
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c kstest.c -o kstest.o
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c sep.c -o sep.o
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c twosample.perm.c -o twosample.perm.o
gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c twosample.single.c -o twosample.single.o
gcc -G -L/usr/local/lib -o twilight.so confidence.line.o correlation.o kstest.o sep.o twosample.perm.o twosample.single.o   
** R
** data
** inst
** preparing package for lazy loading
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'twilight'
     Formats: text html latex example 
  exfdr                             text    html    latex
  expval                            text    html    latex
  plot.twilight                     text    html    latex   example
  print.twilight                    text    html    latex   example
  twilight                          text    html    latex   example
  twilight.combi                    text    html    latex   example
  twilight.filtering                text    html    latex   example
  twilight.getlambda                text    html    latex
  twilight.getmatrix                text    html    latex
  twilight.permute.pair             text    html    latex
  twilight.permute.unpair           text    html    latex
  twilight.pval                     text    html    latex   example
  twilight.teststat                 text    html    latex   example
** building package indices ...
* DONE (twilight)
* creating vignettes ... ERROR

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Warning message:
unable to open connection to X11 display '' 

Error:  chunk 10 
Error in X11(paste("png::", filename, sep = ""), width, height, pointsize,  : 
	unable to start device PNG
Error in buildVignettes(dir = ".") : Error:  chunk 10 
Error in X11(paste("png::", filename, sep = ""), width, height, pointsize,  : 
	unable to start device PNG
Execution halted