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Package 161/172OSArchBUILDCHECKBUILD BIN

stam

1.4.0

Claudio Lottaz
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  OK 
Solaris 2.9 sparc OK  OK 
Linux (SUSE 10.0) x86_64 OK  OK 
Windows Server 2003 x86_64[ OK ] OK  OK 
Package: stam
Version: 1.4.0
Command: D:\biocbld\1.8d\R\bin\R.exe CMD build stam
RetCode: 0
Time: 449.0 seconds
Status: OK
PackageFile: stam_1.4.0.tar.gz

Command output

* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/1.8d/tmpdir/Rinst716464108


---------- Making package stam ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making util.d from util.c
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2   -c util.c -o util.o
windres --include-dir d:/biocbld/1.8d/R/include  -i stam_res.rc -o stam_res.o
gcc  -shared -s  -o stam.dll stam.def util.o stam_res.o  -Ld:/biocbld/1.8d/R/bin   -lR
  ... DLL made
  installing DLL
  installing R files
  save image
Loading required package: GO
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: pamr
Loading required package: cluster
Loading required package: annaffy
Loading required package: KEGG
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'stam'
     Formats: text html latex example chm 
  golubTrain.cv                     text    html    latex           chm
  golubTrain.fit                    text    html    latex           chm
  image.stamPrediction              text    html    latex           chm
  plot.stamCV                       text    html    latex           chm
  plot.stamFit                      text    html    latex           chm
  plot.stamPrediction               text    html    latex           chm
  stam-internal                     text    html    latex           chm
  stam.cv                           text    html    latex   example chm
  stam.evaluate                     text    html    latex   example chm
  stam.fit                          text    html    latex   example chm
  stam.graph.plot                   text    html    latex           chm
  stam.net                          text    html    latex   example chm
  stam.predict                      text    html    latex   example chm
  stam.rgb.colors                   text    html    latex   example chm
  stam.serve                        text    html    latex   example chm
  stam.writeHTML                    text    html    latex   example chm
  stamCV-class                      text    html    latex           chm
  stamEval-class                    text    html    latex           chm
  stamFit-class                     text    html    latex           chm
  stamINode-class                   text    html    latex           chm
  stamLeaf-class                    text    html    latex           chm
  stamNet-class                     text    html    latex           chm
  stamNode-class                    text    html    latex           chm
  stamPrediction-class              text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\1.8d\Rpacks\stam\chm\stam.chm





Compile time: 0 minutes, 0 seconds

25	Topics

128	Local links

0	Internet links

1	Graphic





Created d:\biocbld\1.8d\Rpacks\stam\chm\stam.chm, 54,343 bytes

Compression decreased file by 68,356 bytes.

  adding MD5 sums

* DONE (stam)
* creating vignettes ... OK
* cleaning src
* removing junk files
* excluding invalid files from 'stam'
Subdirectory 'R' contains invalid file names:
  TAGS
Subdirectory 'man' contains invalid file names:
  TAGS
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'stam_1.4.0.tar.gz'